Package: PAICE 1.0.2

Alberto J. Coello

PAICE: Phylogeographic Analysis of Island Colonization Events

Estimation of the number of colonization events between islands of the same archipelago for a species. It uses rarefaction curves to control for both field and genetic sample sizes as it was described in Coello et al. (2022) <doi:10.1111/jbi.14341>.

Authors:Alberto J. Coello [aut, cre], Mario Fernández-Mazuecos [aut], Ruben H. Heleno [aut], Pablo Vargas [aut]

PAICE_1.0.2.tar.gz
PAICE_1.0.2.zip(r-4.7)PAICE_1.0.2.zip(r-4.6)PAICE_1.0.2.zip(r-4.5)
PAICE_1.0.2.tgz(r-4.6-any)PAICE_1.0.2.tgz(r-4.5-any)
PAICE_1.0.2.tar.gz(r-4.7-any)PAICE_1.0.2.tar.gz(r-4.6-any)
PAICE_1.0.2.tgz(r-4.6-emscripten)
manual.pdf |manual.html
DESCRIPTION
card.svg |card.png
PAICE/json (API)

# Install 'PAICE' in R:
install.packages('PAICE', repos = c('https://paicecode.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/paicecode/paice/issues

Datasets:
  • CmonsData - Occurrence matrix of _Cistus monspeliensis_ in the Canary Islands
  • CmonsNetwork - Genealogical relationship of _Cistus monspeliensis_ haplotypes
  • CmonsRare - Simulated rarefaction curves of _Cistus monspeliensis_

On CRAN:

Conda:

biogeographycolonizationisland

2.70 score 1 stars 4 scripts 592 downloads 5 exports 0 dependencies

Last updated from:7e48399ca0. Checks:2 ERROR, 2 OK, 5 WARNING. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64ERROR127
source / vignettesOK161
linux-release-x86_64ERROR119
macos-release-arm64WARNING180
macos-oldrel-arm64WARNING153
windows-develWARNING64
windows-releaseWARNING69
windows-oldrelWARNING296
wasm-releaseOK142

Exports:colonizationgeneticResamplingmaxColrarecolread.rarecol

Dependencies: